Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rfwd3Q8CIK8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm13736-201ENSMUST00000119272 253 ntBASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm13297-201ENSMUST00000120205 934 ntBASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.68□□□□□ -0.54
Rfwd3Q8CIK8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gm18935-201ENSMUST00000212692 664 ntBASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gm8227-201ENSMUST00000223306 571 ntBASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.67□□□□□ -0.54
Rfwd3Q8CIK8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms