Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Gm22133-201ENSMUST00000102082 109 ntBASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Rprl1-201ENSMUST00000158050 327 ntBASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Gm28450-201ENSMUST00000187349 638 ntBASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.15□□□□□ -0.3
Rftn2Q8CHX7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rftn2Q8CHX7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rftn2Q8CHX7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rftn2Q8CHX7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rftn2Q8CHX7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm12217-201ENSMUST00000118858 696 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm12266-201ENSMUST00000120311 962 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Mir6927-201ENSMUST00000184494 71 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rftn2Q8CHX7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Gm17040-202ENSMUST00000170597 889 ntBASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Gm28071-201ENSMUST00000190355 478 ntBASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Gm7003-201ENSMUST00000195089 312 ntBASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rftn2Q8CHX7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms