Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps53Q8CCB4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm8738-201ENSMUST00000172606 329 ntBASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm37042-201ENSMUST00000193816 581 ntBASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Nsd1-205ENSMUST00000224693 852 ntBASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps53Q8CCB4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm24830-201ENSMUST00000102024 166 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm14704-201ENSMUST00000120300 874 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm22121-201ENSMUST00000175148 54 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm25890-201ENSMUST00000177643 165 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm22614-201ENSMUST00000178300 165 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm26956-201ENSMUST00000182176 986 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm22042-201ENSMUST00000082989 165 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm26232-201ENSMUST00000083360 166 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm24136-201ENSMUST00000083374 165 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms