Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm4986-201ENSMUST00000119731 549 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim9Q8C7M3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trim9Q8C7M3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim9Q8C7M3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trim9Q8C7M3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm24934-201ENSMUST00000103764 111 ntBASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm13297-201ENSMUST00000120205 934 ntBASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm14832-201ENSMUST00000121289 322 ntBASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm24845-201ENSMUST00000158034 109 ntBASIC13.64□□□□□ -0.23
Trim9Q8C7M3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trim9Q8C7M3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm10608-202ENSMUST00000213924 676 ntBASIC13.63□□□□□ -0.23
Trim9Q8C7M3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms