Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm9230-201ENSMUST00000188228 532 ntBASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm29155-201ENSMUST00000185910 269 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm37246-201ENSMUST00000192665 835 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptcd1Q8C2E4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Gm11941-201ENSMUST00000119904 610 ntBASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Gm11675-201ENSMUST00000121873 832 ntBASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ptcd1Q8C2E4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptcd1Q8C2E4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Gm13315-201ENSMUST00000120376 991 ntBASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms