Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm24447-201ENSMUST00000083977 338 ntBASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tsen54Q8C2A2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tsen54Q8C2A2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm15376-201ENSMUST00000122258 783 ntBASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm17330-201ENSMUST00000221047 165 ntBASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gm5161-201ENSMUST00000075243 853 ntBASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tsen54Q8C2A2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms