Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp47Q8BY87 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp47Q8BY87 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp47Q8BY87 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp47Q8BY87 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Gm23949-201ENSMUST00000104027 127 ntBASIC17.41■□□□□ 0.38
Usp47Q8BY87 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Gm15711-201ENSMUST00000118889 535 ntBASIC17.41■□□□□ 0.38
Usp47Q8BY87 Gm27530-201ENSMUST00000184096 98 ntBASIC17.41■□□□□ 0.38
Usp47Q8BY87 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Usp47Q8BY87 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp47Q8BY87 Gm22133-201ENSMUST00000102082 109 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gm5419-201ENSMUST00000119301 527 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gm4607-201ENSMUST00000206649 577 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gm18730-201ENSMUST00000218038 343 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gm13812-201ENSMUST00000118061 1347 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gm13810-201ENSMUST00000118584 1347 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 AC107638.1-201ENSMUST00000213690 1061 ntBASIC17.4■□□□□ 0.38
Usp47Q8BY87 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp47Q8BY87 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Usp47Q8BY87 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.39■□□□□ 0.38
Usp47Q8BY87 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp47Q8BY87 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp47Q8BY87 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm5525-201ENSMUST00000190438 1312 ntBASIC17.39■□□□□ 0.37
Usp47Q8BY87 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.39■□□□□ 0.37
Usp47Q8BY87 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp47Q8BY87 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Gm17931-201ENSMUST00000208132 634 ntBASIC17.39■□□□□ 0.37
Usp47Q8BY87 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp47Q8BY87 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp47Q8BY87 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp47Q8BY87 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.38■□□□□ 0.37
Usp47Q8BY87 Gm7224-201ENSMUST00000121359 2066 ntBASIC17.38■□□□□ 0.37
Usp47Q8BY87 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp47Q8BY87 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp47Q8BY87 AC126257.1-201ENSMUST00000213195 1536 ntBASIC17.38■□□□□ 0.37
Usp47Q8BY87 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp47Q8BY87 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms