Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm14928-201ENSMUST00000120198 477 ntBASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm11964-201ENSMUST00000120982 444 ntBASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm22331-201ENSMUST00000158066 136 ntBASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm9022-201ENSMUST00000182482 992 ntBASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdhr3Q8BL00 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Mir1894-201ENSMUST00000122802 81 ntBASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm8652-201ENSMUST00000181363 964 ntBASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm44882-201ENSMUST00000205702 802 ntBASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Gm5356-201ENSMUST00000093326 615 ntBASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdhr3Q8BL00 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdhr3Q8BL00 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms