Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm12266-201ENSMUST00000120311 962 ntBASIC11.87□□□□□ -0.51
Vrk1Q80X41 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm17040-202ENSMUST00000170597 889 ntBASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm8959-201ENSMUST00000213150 571 ntBASIC11.87□□□□□ -0.51
Vrk1Q80X41 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.87□□□□□ -0.51
Vrk1Q80X41 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vrk1Q80X41 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm14644-201ENSMUST00000116671 647 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Rmrp-201ENSMUST00000157463 271 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm22334-201ENSMUST00000158070 133 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm29615-201ENSMUST00000185371 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28224-201ENSMUST00000186078 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm29001-201ENSMUST00000186177 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28292-201ENSMUST00000186593 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28101-201ENSMUST00000187608 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm29076-201ENSMUST00000187689 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28302-201ENSMUST00000187931 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28646-201ENSMUST00000188220 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28205-201ENSMUST00000189177 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm29032-201ENSMUST00000189797 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm28695-201ENSMUST00000190300 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm37448-201ENSMUST00000192795 697 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.86□□□□□ -0.51
Vrk1Q80X41 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vrk1Q80X41 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms