Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.55□□□□□ -0.56
Pif1Q80SX8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm9083-201ENSMUST00000120423 819 ntBASIC11.55□□□□□ -0.56
Pif1Q80SX8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm14999-201ENSMUST00000121039 624 ntBASIC11.55□□□□□ -0.56
Pif1Q80SX8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm25732-201ENSMUST00000175168 60 ntBASIC11.55□□□□□ -0.56
Pif1Q80SX8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.55□□□□□ -0.56
Pif1Q80SX8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pif1Q80SX8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm16296-201ENSMUST00000159905 325 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm5070-201ENSMUST00000177599 862 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Rprl1-202ENSMUST00000198476 238 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm45224-201ENSMUST00000208203 414 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm45433-201ENSMUST00000209386 247 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm8913-201ENSMUST00000209491 641 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.54□□□□□ -0.56
Pif1Q80SX8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pif1Q80SX8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms