Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm15703-201ENSMUST00000120250 880 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm7046-201ENSMUST00000221351 977 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Olfr582-201ENSMUST00000098212 960 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.58□□□□□ -0.4
Casc4Q6P2L7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Gm13875-201ENSMUST00000120162 282 ntBASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Gm8018-201ENSMUST00000173536 789 ntBASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Gm45331-201ENSMUST00000209868 554 ntBASIC12.57□□□□□ -0.4
Casc4Q6P2L7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Casc4Q6P2L7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms