Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Gm9136-201ENSMUST00000193368 454 ntBASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Gm44882-201ENSMUST00000205702 802 ntBASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Gm18968-201ENSMUST00000221319 862 ntBASIC18.74■□□□□ 0.59
Slx4Q6P1D7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 AC102368.1-201ENSMUST00000227161 892 ntBASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Gm24398-201ENSMUST00000157870 109 ntBASIC18.73■□□□□ 0.59
Slx4Q6P1D7 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slx4Q6P1D7 Gm12783-201ENSMUST00000121425 397 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm45500-201ENSMUST00000211676 803 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm5434-202ENSMUST00000222384 1451 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm5434-201ENSMUST00000071825 1451 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm4604-201ENSMUST00000025040 390 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm5805-201ENSMUST00000072779 456 ntBASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slx4Q6P1D7 Gm37644-201ENSMUST00000192190 2270 ntBASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm26989-201ENSMUST00000182608 749 ntBASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm3726-201ENSMUST00000203110 785 ntBASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Gm43912-201ENSMUST00000204352 538 ntBASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 AC166836.1-201ENSMUST00000219933 1795 ntBASIC18.71■□□□□ 0.59
Slx4Q6P1D7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slx4Q6P1D7 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms