Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt39Q6IFX4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm27243-201ENSMUST00000183964 521 ntBASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm7561-201ENSMUST00000211203 886 ntBASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm24136-201ENSMUST00000083374 165 ntBASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt39Q6IFX4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm12390-201ENSMUST00000117897 397 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm11597-201ENSMUST00000121423 964 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm35960-201ENSMUST00000202712 767 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt39Q6IFX4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms