Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm14659-201ENSMUST00000117667 843 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm5970-201ENSMUST00000131638 1216 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm37604-201ENSMUST00000191749 1272 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm43184-201ENSMUST00000197247 542 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf8Q6DID3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm24934-201ENSMUST00000103764 111 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Mir874-201ENSMUST00000104769 76 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm22709-201ENSMUST00000116893 111 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm12857-201ENSMUST00000117678 592 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm11451-201ENSMUST00000118946 630 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm6485-201ENSMUST00000160676 439 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Mir8115-201ENSMUST00000184992 119 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm43520-201ENSMUST00000197996 164 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gm45072-201ENSMUST00000208673 929 ntBASIC14.53□□□□□ -0.08
Scaf8Q6DID3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf8Q6DID3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms