Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Gm11578-201ENSMUST00000118530 459 ntBASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Gm17192-201ENSMUST00000169031 511 ntBASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarca2Q6DIC0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Matn2-206ENSMUST00000228570 2798 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm13351-201ENSMUST00000118087 414 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm22146-201ENSMUST00000157397 288 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm9507-202ENSMUST00000180157 654 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm45592-201ENSMUST00000209605 1043 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 AC158388.3-202ENSMUST00000225517 775 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm44152-201ENSMUST00000205007 1691 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm9796-201ENSMUST00000062249 2250 ntBASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarca2Q6DIC0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm25053-201ENSMUST00000103982 133 ntBASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm25922-201ENSMUST00000104281 130 ntBASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm24679-201ENSMUST00000158762 111 ntBASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm25053-202ENSMUST00000199731 132 ntBASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm5780-201ENSMUST00000217774 1834 ntBASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smarca2Q6DIC0 Gm15172-201ENSMUST00000118945 1046 ntBASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Gm43852-201ENSMUST00000202098 917 ntBASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Smarca2Q6DIC0 Gm43334-201ENSMUST00000197740 1318 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm28323-201ENSMUST00000186817 2499 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm15615-201ENSMUST00000118876 198 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm13117-201ENSMUST00000120894 691 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms