Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.83□□□□□ -0.52
Rai1Q61818 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rai1Q61818 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.83□□□□□ -0.52
Rai1Q61818 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rai1Q61818 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.83□□□□□ -0.52
Rai1Q61818 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Rai1Q61818 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Gm15566-201ENSMUST00000121130 590 ntBASIC11.83□□□□□ -0.52
Rai1Q61818 Mir1901-201ENSMUST00000122616 78 ntBASIC11.83□□□□□ -0.52
Rai1Q61818 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.83□□□□□ -0.52
Rai1Q61818 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.83□□□□□ -0.52
Rai1Q61818 Gm34023-201ENSMUST00000195539 217 ntBASIC11.83□□□□□ -0.52
Rai1Q61818 Gm5714-201ENSMUST00000197343 566 ntBASIC11.83□□□□□ -0.52
Rai1Q61818 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rai1Q61818 Gm25517-201ENSMUST00000083865 134 ntBASIC11.83□□□□□ -0.52
Rai1Q61818 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rai1Q61818 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rai1Q61818 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Rai1Q61818 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Rai1Q61818 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.82□□□□□ -0.52
Rai1Q61818 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rai1Q61818 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rai1Q61818 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Gm16071-201ENSMUST00000119589 793 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Gm17826-201ENSMUST00000189720 798 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.82□□□□□ -0.52
Rai1Q61818 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.82□□□□□ -0.52
Rai1Q61818 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.82□□□□□ -0.52
Rai1Q61818 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rai1Q61818 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rai1Q61818 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rai1Q61818 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rai1Q61818 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.81□□□□□ -0.52
Rai1Q61818 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rai1Q61818 Gm13916-201ENSMUST00000117368 628 ntBASIC11.81□□□□□ -0.52
Rai1Q61818 Gm15352-201ENSMUST00000118696 270 ntBASIC11.81□□□□□ -0.52
Rai1Q61818 Gm15207-201ENSMUST00000119259 442 ntBASIC11.81□□□□□ -0.52
Rai1Q61818 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rai1Q61818 Gm8815-201ENSMUST00000173809 620 ntBASIC11.81□□□□□ -0.52
Rai1Q61818 Gm4310-201ENSMUST00000177847 889 ntBASIC11.81□□□□□ -0.52
Rai1Q61818 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.81□□□□□ -0.52
Rai1Q61818 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.81□□□□□ -0.52
Rai1Q61818 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rai1Q61818 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms