Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Mir7035-201ENSMUST00000184713 82 ntBASIC16.26■□□□□ 0.19
Gli3Q61602 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC16.26■□□□□ 0.19
Gli3Q61602 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC16.26■□□□□ 0.19
Gli3Q61602 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gli3Q61602 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.26■□□□□ 0.19
Gli3Q61602 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Gli3Q61602 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.25■□□□□ 0.19
Gli3Q61602 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Gm13281-201ENSMUST00000120871 567 ntBASIC16.25■□□□□ 0.19
Gli3Q61602 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC16.25■□□□□ 0.19
Gli3Q61602 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC16.25■□□□□ 0.19
Gli3Q61602 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC16.25■□□□□ 0.19
Gli3Q61602 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC16.25■□□□□ 0.19
Gli3Q61602 Gm5650-201ENSMUST00000209641 598 ntBASIC16.25■□□□□ 0.19
Gli3Q61602 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gli3Q61602 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.25■□□□□ 0.19
Gli3Q61602 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gli3Q61602 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 Gm12129-201ENSMUST00000120104 1147 ntBASIC16.24■□□□□ 0.19
Gli3Q61602 Mir6359-201ENSMUST00000183668 81 ntBASIC16.24■□□□□ 0.19
Gli3Q61602 Gm43866-201ENSMUST00000203894 839 ntBASIC16.24■□□□□ 0.19
Gli3Q61602 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Gli3Q61602 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.24■□□□□ 0.19
Gli3Q61602 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.24■□□□□ 0.19
Gli3Q61602 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gli3Q61602 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Gm8019-201ENSMUST00000119317 587 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Gm28937-201ENSMUST00000185413 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm29400-201ENSMUST00000187208 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm28662-201ENSMUST00000188446 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm28251-201ENSMUST00000188835 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm37318-201ENSMUST00000194325 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm38017-201ENSMUST00000194768 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm37287-201ENSMUST00000195449 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm37793-201ENSMUST00000195548 695 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.23■□□□□ 0.19
Gli3Q61602 AC134248.1-201ENSMUST00000216113 1176 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC16.23■□□□□ 0.19
Gli3Q61602 Capsl-202ENSMUST00000226688 739 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Gm42970-201ENSMUST00000196407 1352 ntBASIC16.23■□□□□ 0.19
Gli3Q61602 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gli3Q61602 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gli3Q61602 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Gm12736-201ENSMUST00000119330 236 ntBASIC16.22■□□□□ 0.19
Gli3Q61602 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC16.22■□□□□ 0.19
Gli3Q61602 Gm6612-201ENSMUST00000170777 395 ntBASIC16.22■□□□□ 0.19
Gli3Q61602 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Gm6450-201ENSMUST00000200896 574 ntBASIC16.22■□□□□ 0.19
Gli3Q61602 Gm6518-201ENSMUST00000208450 342 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms