Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm17415-201ENSMUST00000096427 789 ntBASIC9.41□□□□□ -0.9
Foxc1Q61572 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Foxc1Q61572 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Foxc1Q61572 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm9575-201ENSMUST00000122140 1339 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm14350-201ENSMUST00000116642 640 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm11618-201ENSMUST00000117946 267 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm37424-201ENSMUST00000191727 561 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm44069-201ENSMUST00000204898 506 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.4□□□□□ -0.9
Foxc1Q61572 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Foxc1Q61572 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Foxc1Q61572 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Foxc1Q61572 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms