Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm24231-201ENSMUST00000104315 133 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfaip3Q60769 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Mir877-201ENSMUST00000104738 85 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm27046-201ENSMUST00000182160 463 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm28882-201ENSMUST00000185504 314 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm4857-201ENSMUST00000192718 785 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Gm13097-201ENSMUST00000210722 397 ntBASIC11.69□□□□□ -0.54
Tnfaip3Q60769 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfaip3Q60769 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms