Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shroom1Q5SX79 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Shroom1Q5SX79 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Shroom1Q5SX79 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shroom1Q5SX79 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shroom1Q5SX79 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shroom1Q5SX79 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm6963-201ENSMUST00000147879 379 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm25732-201ENSMUST00000175168 60 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm3786-201ENSMUST00000202659 378 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm8913-201ENSMUST00000209491 641 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm8385-201ENSMUST00000058999 643 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shroom1Q5SX79 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Mir6927-201ENSMUST00000184494 71 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm32999-201ENSMUST00000192693 562 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm19187-201ENSMUST00000206781 892 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm39404-201ENSMUST00000216350 313 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm10076-201ENSMUST00000073238 384 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms