Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm28292-201ENSMUST00000186593 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm28101-201ENSMUST00000187608 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm29076-201ENSMUST00000187689 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm28302-201ENSMUST00000187931 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm28646-201ENSMUST00000188220 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm28205-201ENSMUST00000189177 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm29032-201ENSMUST00000189797 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm28695-201ENSMUST00000190300 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm37448-201ENSMUST00000192795 697 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Paupar-201ENSMUST00000194826 3482 ntBASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38aQ4FK66 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Gm18753-201ENSMUST00000201000 566 ntBASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38aQ4FK66 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm23200-201ENSMUST00000104379 132 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm25732-201ENSMUST00000175168 60 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm27627-201ENSMUST00000183644 150 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 AY036118-201ENSMUST00000200021 923 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.47□□□□□ -0.09
Prpf38aQ4FK66 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms