Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fam196aQ3USH1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fam196aQ3USH1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fam196aQ3USH1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fam196aQ3USH1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fam196aQ3USH1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fam196aQ3USH1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm11663-201ENSMUST00000117888 290 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm13549-201ENSMUST00000118339 796 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm15036-201ENSMUST00000118880 400 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm43610-201ENSMUST00000199117 365 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fam196aQ3USH1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fam196aQ3USH1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm12990-201ENSMUST00000120372 468 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm15566-201ENSMUST00000121130 590 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm18204-201ENSMUST00000209835 793 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms