Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Gm27023-201ENSMUST00000182372 285 ntBASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Olfr284-202ENSMUST00000206647 966 ntBASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Morn2-202ENSMUST00000227729 656 ntBASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctdnep1Q3TP92 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ctdnep1Q3TP92 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Gm28882-201ENSMUST00000185504 314 ntBASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ctdnep1Q3TP92 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Gm10434-201ENSMUST00000101158 471 ntBASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Gm10608-202ENSMUST00000213924 676 ntBASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ctdnep1Q3TP92 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms