Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm17073-201ENSMUST00000168069 556 ntBASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Gm18711-201ENSMUST00000199341 750 ntBASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Gm44159-201ENSMUST00000204065 442 ntBASIC6.34□□□□□ -1.4
Ush2AQ2QI47 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 AC113060.1-201ENSMUST00000225689 1573 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm14699-201ENSMUST00000122340 228 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm15727-201ENSMUST00000122416 437 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm37858-201ENSMUST00000192759 1231 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm38192-201ENSMUST00000194364 1847 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 AC122459.4-201ENSMUST00000228654 551 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm25770-201ENSMUST00000158566 115 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm15664-201ENSMUST00000160167 184 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm4982-201ENSMUST00000160440 1098 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm16480-201ENSMUST00000120439 832 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm38117-201ENSMUST00000194653 939 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 AC132881.1-201ENSMUST00000223780 1062 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm4925-202ENSMUST00000168843 1561 ntBASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ush2AQ2QI47 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm13217-201ENSMUST00000120466 953 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm8464-202ENSMUST00000146697 1142 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm4750-201ENSMUST00000151942 1142 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm25154-201ENSMUST00000157123 119 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm37819-201ENSMUST00000194626 1065 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 AC134601.2-201ENSMUST00000221071 130 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms