Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm43341-201ENSMUST00000200104 1308 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm44897-201ENSMUST00000206187 1341 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm24279-201ENSMUST00000104236 131 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm13351-201ENSMUST00000118087 414 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm13736-201ENSMUST00000119272 253 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm11978-201ENSMUST00000122315 466 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm10731-201ENSMUST00000181171 448 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm7684-201ENSMUST00000211891 829 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 AC131100.2-201ENSMUST00000227701 998 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Zfp850-201ENSMUST00000099111 941 ntBASIC12.41□□□□□ -0.42
Col9a1Q05722 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col9a1Q05722 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Col9a1Q05722 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm38368-201ENSMUST00000193181 1335 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm22133-201ENSMUST00000102082 109 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm5392-201ENSMUST00000122189 789 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm28934-201ENSMUST00000186491 346 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm28195-201ENSMUST00000186992 372 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm3116-201ENSMUST00000189440 1116 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Platr10-202ENSMUST00000191479 818 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm5700-201ENSMUST00000191483 989 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm5650-201ENSMUST00000209641 598 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm18387-201ENSMUST00000220333 702 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm10580-201ENSMUST00000097985 396 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm10581-201ENSMUST00000097986 231 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm10582-201ENSMUST00000097987 396 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm10583-201ENSMUST00000097988 396 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms