Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GabpaQ00422 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.04□□□□□ -0.16
GabpaQ00422 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.03□□□□□ -0.16
GabpaQ00422 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GabpaQ00422 Gm11450-201ENSMUST00000121144 333 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.03□□□□□ -0.16
GabpaQ00422 Gm23699-201ENSMUST00000158835 135 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
GabpaQ00422 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.03□□□□□ -0.16
GabpaQ00422 Gm5369-201ENSMUST00000217499 588 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GabpaQ00422 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GabpaQ00422 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.03□□□□□ -0.16
GabpaQ00422 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GabpaQ00422 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.02□□□□□ -0.16
GabpaQ00422 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
GabpaQ00422 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.02□□□□□ -0.16
GabpaQ00422 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.02□□□□□ -0.17
GabpaQ00422 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.02□□□□□ -0.17
GabpaQ00422 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Gm5523-201ENSMUST00000180415 997 ntBASIC14.02□□□□□ -0.17
GabpaQ00422 Gm18038-201ENSMUST00000197900 485 ntBASIC14.02□□□□□ -0.17
GabpaQ00422 Gm8959-201ENSMUST00000213150 571 ntBASIC14.02□□□□□ -0.17
GabpaQ00422 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GabpaQ00422 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
GabpaQ00422 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.02□□□□□ -0.17
GabpaQ00422 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GabpaQ00422 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GabpaQ00422 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GabpaQ00422 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.01□□□□□ -0.17
GabpaQ00422 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.01□□□□□ -0.17
GabpaQ00422 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms