Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.42□□□□□ -0.74
Npas1P97459 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.42□□□□□ -0.74
Npas1P97459 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.42□□□□□ -0.74
Npas1P97459 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Npas1P97459 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Gm29667-201ENSMUST00000190817 490 ntBASIC10.42□□□□□ -0.74
Npas1P97459 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.42□□□□□ -0.74
Npas1P97459 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Gm9797-201ENSMUST00000052902 613 ntBASIC10.42□□□□□ -0.74
Npas1P97459 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Npas1P97459 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.42□□□□□ -0.74
Npas1P97459 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Npas1P97459 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Npas1P97459 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Npas1P97459 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.41□□□□□ -0.74
Npas1P97459 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.41□□□□□ -0.74
Npas1P97459 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Npas1P97459 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.41□□□□□ -0.74
Npas1P97459 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.41□□□□□ -0.74
Npas1P97459 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.41□□□□□ -0.74
Npas1P97459 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Gm20445-201ENSMUST00000061905 565 ntBASIC10.41□□□□□ -0.74
Npas1P97459 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Npas1P97459 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.41□□□□□ -0.74
Npas1P97459 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Gm13689-201ENSMUST00000119360 685 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Gm11978-201ENSMUST00000122315 466 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms