Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.61□□□□□ -0.23
Lig3P97386 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lig3P97386 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lig3P97386 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.6□□□□□ -0.23
Lig3P97386 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.6□□□□□ -0.23
Lig3P97386 Gm11331-201ENSMUST00000119764 288 ntBASIC13.6□□□□□ -0.23
Lig3P97386 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.6□□□□□ -0.23
Lig3P97386 Gm12363-201ENSMUST00000122250 668 ntBASIC13.6□□□□□ -0.23
Lig3P97386 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Lig3P97386 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.6□□□□□ -0.23
Lig3P97386 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lig3P97386 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lig3P97386 Gm4768-201ENSMUST00000206199 686 ntBASIC13.6□□□□□ -0.23
Lig3P97386 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lig3P97386 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.6□□□□□ -0.23
Lig3P97386 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.6□□□□□ -0.23
Lig3P97386 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lig3P97386 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Lig3P97386 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lig3P97386 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Lig3P97386 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.59□□□□□ -0.23
Lig3P97386 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Lig3P97386 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Gm11628-201ENSMUST00000117568 171 ntBASIC13.59□□□□□ -0.23
Lig3P97386 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.59□□□□□ -0.23
Lig3P97386 Gm26185-201ENSMUST00000157692 266 ntBASIC13.59□□□□□ -0.23
Lig3P97386 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Lig3P97386 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.59□□□□□ -0.23
Lig3P97386 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.59□□□□□ -0.23
Lig3P97386 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.59□□□□□ -0.23
Lig3P97386 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Lig3P97386 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lig3P97386 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.59□□□□□ -0.23
Lig3P97386 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Lig3P97386 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.58□□□□□ -0.23
Lig3P97386 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lig3P97386 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lig3P97386 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lig3P97386 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lig3P97386 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lig3P97386 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.58□□□□□ -0.23
Lig3P97386 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Lig3P97386 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms