Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PrkdcP97313 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC8.15□□□□□ -1.1
PrkdcP97313 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 AC126262.1-201ENSMUST00000221802 1904 ntBASIC8.15□□□□□ -1.1
PrkdcP97313 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Gm12009-201ENSMUST00000121361 1100 ntBASIC8.15□□□□□ -1.11
PrkdcP97313 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC8.15□□□□□ -1.11
PrkdcP97313 Gm4895-201ENSMUST00000181646 1137 ntBASIC8.15□□□□□ -1.11
PrkdcP97313 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC8.15□□□□□ -1.11
PrkdcP97313 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC8.15□□□□□ -1.11
PrkdcP97313 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC8.15□□□□□ -1.11
PrkdcP97313 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PrkdcP97313 Gm37348-201ENSMUST00000193104 1789 ntBASIC8.15□□□□□ -1.11
PrkdcP97313 Rnf17-202ENSMUST00000223627 2077 ntBASIC8.15□□□□□ -1.11
PrkdcP97313 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
PrkdcP97313 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
PrkdcP97313 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm44260-201ENSMUST00000204946 2094 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm23132-201ENSMUST00000104254 132 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm13422-201ENSMUST00000118834 504 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Gm14052-201ENSMUST00000121434 1031 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm9192-201ENSMUST00000183221 985 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC8.14□□□□□ -1.11
PrkdcP97313 Grk6-205ENSMUST00000224653 2976 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
PrkdcP97313 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PrkdcP97313 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm24992-201ENSMUST00000157412 130 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Gm5982-201ENSMUST00000196234 512 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC8.14□□□□□ -1.11
PrkdcP97313 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC8.14□□□□□ -1.11
PrkdcP97313 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
PrkdcP97313 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PrkdcP97313 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm6158-201ENSMUST00000109467 904 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Gm24294-201ENSMUST00000158295 277 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Gm6548-201ENSMUST00000167498 1165 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Mir6934-201ENSMUST00000183965 62 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Gm38233-201ENSMUST00000194259 807 ntBASIC8.14□□□□□ -1.11
PrkdcP97313 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PrkdcP97313 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm13347-201ENSMUST00000120298 1353 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms