Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43bP86448 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43bP86448 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim43bP86448 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim43bP86448 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Gm13392-201ENSMUST00000117708 150 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim43bP86448 Gm35960-201ENSMUST00000202712 767 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim43bP86448 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Gm8227-201ENSMUST00000223306 571 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim43bP86448 Gm10268-201ENSMUST00000085340 555 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.77□□□□□ -0.37
Trim43bP86448 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43bP86448 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim43bP86448 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim43bP86448 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 Gm5187-201ENSMUST00000117317 991 ntBASIC12.76□□□□□ -0.37
Trim43bP86448 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim43bP86448 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Gm27682-201ENSMUST00000183930 110 ntBASIC12.76□□□□□ -0.37
Trim43bP86448 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim43bP86448 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43bP86448 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.76□□□□□ -0.37
Trim43bP86448 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim43bP86448 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Trim43bP86448 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trim43bP86448 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trim43bP86448 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43bP86448 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim43bP86448 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms