Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.43□□□□□ -0.26
CiitaP79621 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.43□□□□□ -0.26
CiitaP79621 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CiitaP79621 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CiitaP79621 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.43□□□□□ -0.26
CiitaP79621 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CiitaP79621 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CiitaP79621 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.42□□□□□ -0.26
CiitaP79621 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
CiitaP79621 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CiitaP79621 Mir7070-201ENSMUST00000183657 86 ntBASIC13.42□□□□□ -0.26
CiitaP79621 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Gm17812-201ENSMUST00000204935 318 ntBASIC13.42□□□□□ -0.26
CiitaP79621 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CiitaP79621 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Gm45433-201ENSMUST00000209386 247 ntBASIC13.42□□□□□ -0.26
CiitaP79621 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CiitaP79621 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.42□□□□□ -0.26
CiitaP79621 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.42□□□□□ -0.26
CiitaP79621 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CiitaP79621 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.42□□□□□ -0.26
CiitaP79621 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CiitaP79621 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CiitaP79621 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CiitaP79621 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CiitaP79621 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CiitaP79621 Gm7857-201ENSMUST00000117957 358 ntBASIC13.41□□□□□ -0.26
CiitaP79621 Gm4909-201ENSMUST00000118749 794 ntBASIC13.41□□□□□ -0.26
CiitaP79621 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.41□□□□□ -0.26
CiitaP79621 Gm24749-201ENSMUST00000157838 343 ntBASIC13.41□□□□□ -0.26
CiitaP79621 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Gm16570-201ENSMUST00000161951 436 ntBASIC13.41□□□□□ -0.26
CiitaP79621 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.41□□□□□ -0.26
CiitaP79621 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.41□□□□□ -0.26
CiitaP79621 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.41□□□□□ -0.26
CiitaP79621 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CiitaP79621 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms