Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.22□□□□□ -0.45
Shox2P70390 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.22□□□□□ -0.45
Shox2P70390 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.22□□□□□ -0.45
Shox2P70390 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.22□□□□□ -0.45
Shox2P70390 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Shox2P70390 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.22□□□□□ -0.45
Shox2P70390 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Shox2P70390 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shox2P70390 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Shox2P70390 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Gm13689-201ENSMUST00000119360 685 ntBASIC12.21□□□□□ -0.45
Shox2P70390 Gm12036-201ENSMUST00000120008 530 ntBASIC12.21□□□□□ -0.45
Shox2P70390 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.21□□□□□ -0.45
Shox2P70390 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.21□□□□□ -0.45
Shox2P70390 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.21□□□□□ -0.45
Shox2P70390 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Shox2P70390 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.21□□□□□ -0.45
Shox2P70390 Gm8099-201ENSMUST00000200510 742 ntBASIC12.21□□□□□ -0.45
Shox2P70390 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shox2P70390 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Shox2P70390 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.21□□□□□ -0.46
Shox2P70390 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Shox2P70390 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.21□□□□□ -0.46
Shox2P70390 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.21□□□□□ -0.46
Shox2P70390 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shox2P70390 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Shox2P70390 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Shox2P70390 Gm22121-201ENSMUST00000175148 54 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Gm38294-201ENSMUST00000192831 381 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.2□□□□□ -0.46
Shox2P70390 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.2□□□□□ -0.46
Shox2P70390 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Itm2b-204ENSMUST00000228637 783 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms