Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Stra8P70278 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC17.11■□□□□ 0.33
Stra8P70278 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.11■□□□□ 0.33
Stra8P70278 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Gm28693-202ENSMUST00000190758 331 ntBASIC17.11■□□□□ 0.33
Stra8P70278 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.11■□□□□ 0.33
Stra8P70278 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Gm2238-201ENSMUST00000192074 3669 ntBASIC17.11■□□□□ 0.33
Stra8P70278 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.11■□□□□ 0.33
Stra8P70278 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stra8P70278 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Stra8P70278 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Stra8P70278 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.1■□□□□ 0.33
Stra8P70278 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Gm15824-201ENSMUST00000119516 955 ntBASIC17.1■□□□□ 0.33
Stra8P70278 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra8P70278 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.1■□□□□ 0.33
Stra8P70278 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Stra8P70278 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.1■□□□□ 0.33
Stra8P70278 Gm6266-201ENSMUST00000203844 806 ntBASIC17.1■□□□□ 0.33
Stra8P70278 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.1■□□□□ 0.33
Stra8P70278 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Gm18636-201ENSMUST00000218846 1066 ntBASIC17.1■□□□□ 0.33
Stra8P70278 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra8P70278 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC17.1■□□□□ 0.33
Stra8P70278 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Stra8P70278 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Stra8P70278 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Stra8P70278 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stra8P70278 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 AC156031.2-201ENSMUST00000213107 3310 ntBASIC17.09■□□□□ 0.33
Stra8P70278 Gm43174-201ENSMUST00000195914 2445 ntBASIC17.09■□□□□ 0.33
Stra8P70278 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Ptprm-203ENSMUST00000224091 3773 ntBASIC17.09■□□□□ 0.33
Stra8P70278 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Stra8P70278 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Stra8P70278 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.09■□□□□ 0.33
Stra8P70278 Gm37497-201ENSMUST00000195830 798 ntBASIC17.09■□□□□ 0.33
Stra8P70278 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.09■□□□□ 0.33
Stra8P70278 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stra8P70278 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Stra8P70278 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Stra8P70278 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra8P70278 Map1b-203ENSMUST00000223725 2669 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms