Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Mir1938-201ENSMUST00000158746 100 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm43630-201ENSMUST00000201550 776 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm18054-201ENSMUST00000207539 555 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm9823-201ENSMUST00000051212 327 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm22058-201ENSMUST00000083393 310 ntBASIC10.35□□□□□ -0.75
Pdlim4P70271 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Pdlim4P70271 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pdlim4P70271 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pdlim4P70271 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm10434-201ENSMUST00000101158 471 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm16296-201ENSMUST00000159905 325 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Gm45925-201ENSMUST00000218882 744 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Daam2-202ENSMUST00000224595 1926 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms