Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Six5P70178 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Six5P70178 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Six5P70178 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Gm4986-201ENSMUST00000119731 549 ntBASIC11.61□□□□□ -0.55
Six5P70178 Gm14999-201ENSMUST00000121039 624 ntBASIC11.61□□□□□ -0.55
Six5P70178 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.61□□□□□ -0.55
Six5P70178 Gm2546-201ENSMUST00000182630 991 ntBASIC11.61□□□□□ -0.55
Six5P70178 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Gm39404-201ENSMUST00000216350 313 ntBASIC11.61□□□□□ -0.55
Six5P70178 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.61□□□□□ -0.55
Six5P70178 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Six5P70178 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Six5P70178 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Six5P70178 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Six5P70178 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.6□□□□□ -0.55
Six5P70178 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.6□□□□□ -0.55
Six5P70178 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.6□□□□□ -0.55
Six5P70178 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Six5P70178 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Six5P70178 Gm13875-201ENSMUST00000120162 282 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm13297-201ENSMUST00000120205 934 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm9083-201ENSMUST00000120423 819 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.6□□□□□ -0.55
Six5P70178 Gm13570-201ENSMUST00000140763 309 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.6□□□□□ -0.55
Six5P70178 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Gm37489-201ENSMUST00000191883 159 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm42693-201ENSMUST00000196779 631 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.6□□□□□ -0.55
Six5P70178 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.6□□□□□ -0.55
Six5P70178 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.6□□□□□ -0.55
Six5P70178 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Gm9823-201ENSMUST00000051212 327 ntBASIC11.6□□□□□ -0.55
Six5P70178 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.6□□□□□ -0.55
Six5P70178 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.6□□□□□ -0.55
Six5P70178 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.6□□□□□ -0.55
Six5P70178 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Six5P70178 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms