Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.67□□□□□ -0.22
Hmgb1P63158 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgb1P63158 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Gm8018-201ENSMUST00000173536 789 ntBASIC13.67□□□□□ -0.22
Hmgb1P63158 Gm9022-201ENSMUST00000182482 992 ntBASIC13.67□□□□□ -0.22
Hmgb1P63158 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.67□□□□□ -0.22
Hmgb1P63158 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgb1P63158 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.67□□□□□ -0.22
Hmgb1P63158 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgb1P63158 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb1P63158 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm18584-201ENSMUST00000203098 964 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.66□□□□□ -0.22
Hmgb1P63158 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgb1P63158 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb1P63158 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms