Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Pfn1P62962 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.63□□□□□ -0.87
Pfn1P62962 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Pfn1P62962 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Pfn1P62962 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pfn1P62962 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.63□□□□□ -0.87
Pfn1P62962 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.63□□□□□ -0.87
Pfn1P62962 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.63□□□□□ -0.87
Pfn1P62962 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.63□□□□□ -0.87
Pfn1P62962 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.62□□□□□ -0.87
Pfn1P62962 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.62□□□□□ -0.87
Pfn1P62962 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.62□□□□□ -0.87
Pfn1P62962 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Gm9522-201ENSMUST00000182394 926 ntBASIC9.62□□□□□ -0.87
Pfn1P62962 Gm5279-201ENSMUST00000199575 745 ntBASIC9.62□□□□□ -0.87
Pfn1P62962 Gm42550-201ENSMUST00000201553 960 ntBASIC9.62□□□□□ -0.87
Pfn1P62962 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.62□□□□□ -0.87
Pfn1P62962 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.62□□□□□ -0.87
Pfn1P62962 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Pfn1P62962 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Pfn1P62962 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pfn1P62962 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pfn1P62962 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.61□□□□□ -0.87
Pfn1P62962 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
Pfn1P62962 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.61□□□□□ -0.87
Pfn1P62962 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Pfn1P62962 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pfn1P62962 Gm13223-201ENSMUST00000118609 747 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms