Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vbp1P61759 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.23□□□□□ -0.61
Vbp1P61759 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vbp1P61759 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vbp1P61759 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Gm8410-201ENSMUST00000117225 605 ntBASIC11.22□□□□□ -0.61
Vbp1P61759 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.22□□□□□ -0.61
Vbp1P61759 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.22□□□□□ -0.61
Vbp1P61759 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.22□□□□□ -0.61
Vbp1P61759 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Gm21362-201ENSMUST00000194272 928 ntBASIC11.22□□□□□ -0.61
Vbp1P61759 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.22□□□□□ -0.61
Vbp1P61759 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.22□□□□□ -0.61
Vbp1P61759 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Vbp1P61759 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vbp1P61759 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 BC043934-202ENSMUST00000185694 2356 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.21□□□□□ -0.61
Vbp1P61759 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Vbp1P61759 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Vbp1P61759 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Gm12291-201ENSMUST00000121627 311 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm24158-201ENSMUST00000175263 71 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm3436-201ENSMUST00000179930 840 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Gm27622-201ENSMUST00000183779 60 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Gm43703-201ENSMUST00000200523 763 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Vbp1P61759 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vbp1P61759 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Gm26315-201ENSMUST00000083890 321 ntBASIC11.21□□□□□ -0.61
Vbp1P61759 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vbp1P61759 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vbp1P61759 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vbp1P61759 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Vbp1P61759 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vbp1P61759 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms