Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm15806-201ENSMUST00000120696 955 ntBASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.01□□□□□ -0.65
Sf3b6P59708 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.01□□□□□ -0.65
Sf3b6P59708 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.01□□□□□ -0.65
Sf3b6P59708 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3b6P59708 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11□□□□□ -0.65
Sf3b6P59708 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sf3b6P59708 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11□□□□□ -0.65
Sf3b6P59708 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sf3b6P59708 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11□□□□□ -0.65
Sf3b6P59708 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Snord83b-201ENSMUST00000104546 94 ntBASIC11□□□□□ -0.65
Sf3b6P59708 Gm15429-201ENSMUST00000151268 798 ntBASIC11□□□□□ -0.65
Sf3b6P59708 Gm6152-201ENSMUST00000151704 340 ntBASIC11□□□□□ -0.65
Sf3b6P59708 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11□□□□□ -0.65
Sf3b6P59708 Gm8099-201ENSMUST00000200510 742 ntBASIC11□□□□□ -0.65
Sf3b6P59708 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Sf3b6P59708 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms