Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rhbdl3P58873 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Gm8566-201ENSMUST00000120174 465 ntBASIC14.63□□□□□ -0.07
Rhbdl3P58873 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Gm9630-201ENSMUST00000178304 885 ntBASIC14.63□□□□□ -0.07
Rhbdl3P58873 Gm7467-201ENSMUST00000185173 652 ntBASIC14.63□□□□□ -0.07
Rhbdl3P58873 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.63□□□□□ -0.07
Rhbdl3P58873 Gm1821-202ENSMUST00000227415 750 ntBASIC14.63□□□□□ -0.07
Rhbdl3P58873 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhbdl3P58873 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm5419-201ENSMUST00000119301 527 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm8199-201ENSMUST00000121323 823 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm10051-201ENSMUST00000145209 414 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm8100-201ENSMUST00000182906 988 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm37835-201ENSMUST00000193305 361 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhbdl3P58873 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.61□□□□□ -0.07
Rhbdl3P58873 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.61□□□□□ -0.07
Rhbdl3P58873 Gm15432-201ENSMUST00000121106 195 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms