Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm9083-201ENSMUST00000120423 819 ntBASIC11.86□□□□□ -0.51
Cdkn2bP55271 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.86□□□□□ -0.51
Cdkn2bP55271 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.85□□□□□ -0.51
Cdkn2bP55271 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gm24644-201ENSMUST00000157114 139 ntBASIC11.85□□□□□ -0.51
Cdkn2bP55271 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gm27892-201ENSMUST00000185017 106 ntBASIC11.85□□□□□ -0.51
Cdkn2bP55271 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.85□□□□□ -0.51
Cdkn2bP55271 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.85□□□□□ -0.51
Cdkn2bP55271 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdkn2bP55271 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Gm26927-201ENSMUST00000182385 965 ntBASIC11.84□□□□□ -0.51
Cdkn2bP55271 Gm6745-201ENSMUST00000199216 526 ntBASIC11.84□□□□□ -0.51
Cdkn2bP55271 Gm6007-201ENSMUST00000208170 823 ntBASIC11.84□□□□□ -0.51
Cdkn2bP55271 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms