Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.54□□□□□ -0.4
Lhx3P50481 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.54□□□□□ -0.4
Lhx3P50481 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lhx3P50481 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lhx3P50481 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.54□□□□□ -0.4
Lhx3P50481 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.54□□□□□ -0.4
Lhx3P50481 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Gm4034-201ENSMUST00000187674 480 ntBASIC12.54□□□□□ -0.4
Lhx3P50481 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Lhx3P50481 Gm32999-201ENSMUST00000192693 562 ntBASIC12.54□□□□□ -0.4
Lhx3P50481 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.54□□□□□ -0.4
Lhx3P50481 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.54□□□□□ -0.4
Lhx3P50481 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Lhx3P50481 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx3P50481 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.53□□□□□ -0.4
Lhx3P50481 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm13296-201ENSMUST00000117854 997 ntBASIC12.53□□□□□ -0.4
Lhx3P50481 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.53□□□□□ -0.4
Lhx3P50481 Rprl1-201ENSMUST00000158050 327 ntBASIC12.53□□□□□ -0.4
Lhx3P50481 Gm26361-201ENSMUST00000158868 186 ntBASIC12.53□□□□□ -0.4
Lhx3P50481 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.53□□□□□ -0.4
Lhx3P50481 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lhx3P50481 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lhx3P50481 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx3P50481 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx3P50481 Gm11989-201ENSMUST00000117240 672 ntBASIC12.52□□□□□ -0.41
Lhx3P50481 Gm14130-201ENSMUST00000118417 987 ntBASIC12.52□□□□□ -0.41
Lhx3P50481 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm11362-201ENSMUST00000118838 850 ntBASIC12.52□□□□□ -0.41
Lhx3P50481 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.52□□□□□ -0.41
Lhx3P50481 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.52□□□□□ -0.41
Lhx3P50481 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm44262-201ENSMUST00000204969 372 ntBASIC12.52□□□□□ -0.41
Lhx3P50481 Gm45186-201ENSMUST00000206874 478 ntBASIC12.52□□□□□ -0.41
Lhx3P50481 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lhx3P50481 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms