Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.68□□□□□ -0.38
SftpbP50405 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SftpbP50405 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.68□□□□□ -0.38
SftpbP50405 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.68□□□□□ -0.38
SftpbP50405 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.68□□□□□ -0.38
SftpbP50405 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.68□□□□□ -0.38
SftpbP50405 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.68□□□□□ -0.38
SftpbP50405 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SftpbP50405 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SftpbP50405 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SftpbP50405 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SftpbP50405 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.67□□□□□ -0.38
SftpbP50405 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.67□□□□□ -0.38
SftpbP50405 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.67□□□□□ -0.38
SftpbP50405 Gm7029-201ENSMUST00000173226 450 ntBASIC12.67□□□□□ -0.38
SftpbP50405 Gm9002-201ENSMUST00000178437 499 ntBASIC12.67□□□□□ -0.38
SftpbP50405 Gm27390-201ENSMUST00000184516 176 ntBASIC12.67□□□□□ -0.38
SftpbP50405 Gm38092-201ENSMUST00000195600 653 ntBASIC12.67□□□□□ -0.38
SftpbP50405 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SftpbP50405 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
SftpbP50405 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.67□□□□□ -0.38
SftpbP50405 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SftpbP50405 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.67□□□□□ -0.38
SftpbP50405 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpbP50405 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SftpbP50405 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SftpbP50405 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.66□□□□□ -0.38
SftpbP50405 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.66□□□□□ -0.38
SftpbP50405 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.66□□□□□ -0.38
SftpbP50405 Gm15806-201ENSMUST00000120696 955 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Rmrp-201ENSMUST00000157463 271 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Gm27847-201ENSMUST00000183711 107 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Gm27375-201ENSMUST00000183799 107 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms