Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LmnaP48678 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LmnaP48678 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LmnaP48678 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LmnaP48678 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13□□□□□ -0.33
LmnaP48678 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LmnaP48678 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13□□□□□ -0.33
LmnaP48678 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
LmnaP48678 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LmnaP48678 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LmnaP48678 Gm14201-201ENSMUST00000117627 289 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Gm14665-201ENSMUST00000122294 557 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Gm28450-201ENSMUST00000187349 638 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Gm36943-201ENSMUST00000194422 282 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Gm37720-201ENSMUST00000195497 1241 ntBASIC12.99□□□□□ -0.33
LmnaP48678 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LmnaP48678 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.99□□□□□ -0.33
LmnaP48678 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LmnaP48678 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LmnaP48678 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
LmnaP48678 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
LmnaP48678 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LmnaP48678 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 Gm12813-201ENSMUST00000119615 902 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Gm13665-201ENSMUST00000120830 528 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Gm13813-201ENSMUST00000120998 787 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.98□□□□□ -0.33
LmnaP48678 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.98□□□□□ -0.33
LmnaP48678 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LmnaP48678 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
LmnaP48678 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.97□□□□□ -0.33
LmnaP48678 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LmnaP48678 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms