Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfx3P48381 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfx3P48381 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rfx3P48381 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfx3P48381 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Rfx3P48381 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfx3P48381 Gm13829-201ENSMUST00000119600 138 ntBASIC11.21□□□□□ -0.61
Rfx3P48381 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.21□□□□□ -0.61
Rfx3P48381 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.21□□□□□ -0.61
Rfx3P48381 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Rfx3P48381 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.21□□□□□ -0.61
Rfx3P48381 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.21□□□□□ -0.61
Rfx3P48381 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.21□□□□□ -0.61
Rfx3P48381 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfx3P48381 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Rfx3P48381 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rfx3P48381 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfx3P48381 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfx3P48381 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Rfx3P48381 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfx3P48381 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Rfx3P48381 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfx3P48381 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.2□□□□□ -0.62
Rfx3P48381 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rfx3P48381 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.2□□□□□ -0.62
Rfx3P48381 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rfx3P48381 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rfx3P48381 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rfx3P48381 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.2□□□□□ -0.62
Rfx3P48381 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Rfx3P48381 Gm17150-201ENSMUST00000165577 381 ntBASIC11.2□□□□□ -0.62
Rfx3P48381 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.2□□□□□ -0.62
Rfx3P48381 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.2□□□□□ -0.62
Rfx3P48381 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.2□□□□□ -0.62
Rfx3P48381 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rfx3P48381 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 270.9 ms