Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.12□□□□□ -0.47
Gli1P47806 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gli1P47806 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gli1P47806 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.12□□□□□ -0.47
Gli1P47806 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.12□□□□□ -0.47
Gli1P47806 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.12□□□□□ -0.47
Gli1P47806 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.12□□□□□ -0.47
Gli1P47806 Gm37466-201ENSMUST00000195692 652 ntBASIC12.12□□□□□ -0.47
Gli1P47806 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.12□□□□□ -0.47
Gli1P47806 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.12□□□□□ -0.47
Gli1P47806 Gm44069-201ENSMUST00000204898 506 ntBASIC12.12□□□□□ -0.47
Gli1P47806 Gm18935-201ENSMUST00000212692 664 ntBASIC12.12□□□□□ -0.47
Gli1P47806 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.12□□□□□ -0.47
Gli1P47806 Gm10268-201ENSMUST00000085340 555 ntBASIC12.12□□□□□ -0.47
Gli1P47806 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gli1P47806 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gli1P47806 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
Gli1P47806 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.12□□□□□ -0.47
Gli1P47806 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.11□□□□□ -0.47
Gli1P47806 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Gm13369-201ENSMUST00000119442 987 ntBASIC12.11□□□□□ -0.47
Gli1P47806 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.11□□□□□ -0.47
Gli1P47806 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.11□□□□□ -0.47
Gli1P47806 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Gli1P47806 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.11□□□□□ -0.47
Gli1P47806 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.11□□□□□ -0.47
Gli1P47806 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.11□□□□□ -0.47
Gli1P47806 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.11□□□□□ -0.47
Gli1P47806 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Gli1P47806 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.11□□□□□ -0.47
Gli1P47806 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gli1P47806 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.1□□□□□ -0.47
Gli1P47806 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms