Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Gm12857-201ENSMUST00000117678 592 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 Gm15573-201ENSMUST00000119487 540 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cdx2P43241 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Cdx2P43241 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdx2P43241 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdx2P43241 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.77□□□□□ -0.53
Cdx2P43241 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cdx2P43241 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm11509-201ENSMUST00000117358 325 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm13809-201ENSMUST00000117921 597 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm14724-201ENSMUST00000118400 537 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm7722-201ENSMUST00000120646 741 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdx2P43241 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm8343-201ENSMUST00000182705 994 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm2965-201ENSMUST00000198365 343 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm19287-201ENSMUST00000203190 358 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm4607-201ENSMUST00000206649 577 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm45550-201ENSMUST00000209380 946 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm7600-201ENSMUST00000209657 785 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Gm9132-201ENSMUST00000210182 832 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.76□□□□□ -0.53
Cdx2P43241 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdx2P43241 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdx2P43241 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Cdx2P43241 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdx2P43241 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdx2P43241 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.75□□□□□ -0.53
Cdx2P43241 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Gm8199-201ENSMUST00000121323 823 ntBASIC11.75□□□□□ -0.53
Cdx2P43241 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdx2P43241 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cdx2P43241 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms