Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HttP42859 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.79□□□□□ -0.36
HttP42859 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.79□□□□□ -0.36
HttP42859 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HttP42859 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC12.79□□□□□ -0.36
HttP42859 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HttP42859 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.79□□□□□ -0.36
HttP42859 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HttP42859 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.78□□□□□ -0.36
HttP42859 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.78□□□□□ -0.36
HttP42859 Mir8093-201ENSMUST00000185043 137 ntBASIC12.78□□□□□ -0.36
HttP42859 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HttP42859 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.78□□□□□ -0.36
HttP42859 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
HttP42859 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.78□□□□□ -0.36
HttP42859 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
HttP42859 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HttP42859 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
HttP42859 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
HttP42859 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.77□□□□□ -0.36
HttP42859 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.77□□□□□ -0.36
HttP42859 Gm15374-201ENSMUST00000119313 844 ntBASIC12.77□□□□□ -0.36
HttP42859 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.77□□□□□ -0.36
HttP42859 Gm7525-201ENSMUST00000219425 454 ntBASIC12.77□□□□□ -0.36
HttP42859 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HttP42859 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
HttP42859 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HttP42859 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HttP42859 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HttP42859 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HttP42859 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HttP42859 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HttP42859 Gm5395-201ENSMUST00000121650 915 ntBASIC12.77□□□□□ -0.37
HttP42859 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HttP42859 Gm25569-201ENSMUST00000157175 131 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.77□□□□□ -0.37
HttP42859 Gm5706-201ENSMUST00000181525 993 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm26976-201ENSMUST00000182929 908 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm18552-201ENSMUST00000187425 538 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm8384-201ENSMUST00000190905 704 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.77□□□□□ -0.37
HttP42859 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.77□□□□□ -0.37
HttP42859 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.77□□□□□ -0.37
HttP42859 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.77□□□□□ -0.37
HttP42859 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HttP42859 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.77□□□□□ -0.37
HttP42859 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.77□□□□□ -0.37
HttP42859 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm23595-201ENSMUST00000104306 130 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm23769-201ENSMUST00000104441 121 ntBASIC12.77□□□□□ -0.37
HttP42859 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HttP42859 Gm13094-201ENSMUST00000117930 409 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm27675-201ENSMUST00000184527 94 ntBASIC12.77□□□□□ -0.37
HttP42859 Gm18010-201ENSMUST00000203553 202 ntBASIC12.77□□□□□ -0.37
HttP42859 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HttP42859 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.77□□□□□ -0.37
HttP42859 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.76□□□□□ -0.37
HttP42859 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.76□□□□□ -0.37
HttP42859 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Gm7504-201ENSMUST00000201449 424 ntBASIC12.76□□□□□ -0.37
HttP42859 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.76□□□□□ -0.37
HttP42859 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.76□□□□□ -0.37
HttP42859 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HttP42859 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.76□□□□□ -0.37
HttP42859 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.76□□□□□ -0.37
HttP42859 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms