Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TfamP40630 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TfamP40630 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12□□□□□ -0.49
TfamP40630 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12□□□□□ -0.49
TfamP40630 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TfamP40630 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
TfamP40630 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TfamP40630 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TfamP40630 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12□□□□□ -0.49
TfamP40630 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Gm13492-201ENSMUST00000119772 665 ntBASIC12□□□□□ -0.49
TfamP40630 Gm1335-201ENSMUST00000121653 386 ntBASIC12□□□□□ -0.49
TfamP40630 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12□□□□□ -0.49
TfamP40630 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12□□□□□ -0.49
TfamP40630 Gm27682-201ENSMUST00000183930 110 ntBASIC12□□□□□ -0.49
TfamP40630 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TfamP40630 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
TfamP40630 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12□□□□□ -0.49
TfamP40630 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12□□□□□ -0.49
TfamP40630 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12□□□□□ -0.49
TfamP40630 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TfamP40630 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TfamP40630 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12□□□□□ -0.49
TfamP40630 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TfamP40630 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TfamP40630 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TfamP40630 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.99□□□□□ -0.49
TfamP40630 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TfamP40630 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TfamP40630 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.99□□□□□ -0.49
TfamP40630 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.99□□□□□ -0.49
TfamP40630 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
TfamP40630 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TfamP40630 Gm11964-201ENSMUST00000120982 444 ntBASIC11.99□□□□□ -0.49
TfamP40630 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.99□□□□□ -0.49
TfamP40630 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Gm27390-201ENSMUST00000184516 176 ntBASIC11.99□□□□□ -0.49
TfamP40630 Gm29127-201ENSMUST00000188304 517 ntBASIC11.99□□□□□ -0.49
TfamP40630 Gm43818-201ENSMUST00000200605 466 ntBASIC11.99□□□□□ -0.49
TfamP40630 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.99□□□□□ -0.49
TfamP40630 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.99□□□□□ -0.49
TfamP40630 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TfamP40630 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TfamP40630 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TfamP40630 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.98□□□□□ -0.49
TfamP40630 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TfamP40630 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms