Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm28329-201ENSMUST00000191208 689 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm29171-201ENSMUST00000191397 486 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Gm10731-201ENSMUST00000181171 448 ntBASIC12.71□□□□□ -0.37
Cxcl12P40224 Mir6923-201ENSMUST00000184592 72 ntBASIC12.71□□□□□ -0.37
Cxcl12P40224 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.71□□□□□ -0.37
Cxcl12P40224 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Gm45594-201ENSMUST00000211717 241 ntBASIC12.71□□□□□ -0.37
Cxcl12P40224 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.71□□□□□ -0.37
Cxcl12P40224 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cxcl12P40224 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl12P40224 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.71□□□□□ -0.38
Cxcl12P40224 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cxcl12P40224 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cxcl12P40224 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cxcl12P40224 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.71□□□□□ -0.38
Cxcl12P40224 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl12P40224 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Gm24398-201ENSMUST00000157870 109 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Gm8815-201ENSMUST00000173809 620 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Gm3551-201ENSMUST00000190750 664 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.7□□□□□ -0.38
Cxcl12P40224 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms